PUBLICATION: Yamamoto YY

 

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Original article    Review etc           Japanese article           Patent


Google Scholar Citation



Original articles                                     ( ! favorite,  $ F1000 BIOLOGY selected, # >100 citations)


75.

Cytosolic heme catabolism by alternative localization of heme oxygenase 1 in plant cells.

Chen Y, Nishimura K, Tokizawa M, Yamamoto YY, Oka Y, Matsushita T, Hanada K, Shirai K, Mano S, Shimizu T, Masuda T (2024) Plant Physiol (in press)

https://doi.org/10.1093/plphys/kiae288


74.

STOP1-regulated SMALL AUXIN UP RNA55 (SAUR55) is involved in proton/malate co-secretion for Al tolerance in Arabidopsis.

Agrahari RK, Kobayashi Y, Enomoto T, Miyachi T, Fujita M, Iuchi S, Kobayashi M, Yamamoto YY, Koyama H (2024) Plant Direct 8: e557.

https://doi.org/10.1002/pld3.557


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73.

The transcription factors, STOP1 and TCP20, are required for root system architecture alterations in response to nitrate deficiency.

Tokizawa M, Enomoto T, Chandnani R, Mora-Macías J, Burbridge C, Armenta-Medina A, Kobayashi Y, Yamamoto YY, Koyama H, Kochian LV (2023) Proc Natl Acad Sci USA 120: e2300446120.

https://doi.org/10.1073/pnas.2300446120


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72. !

Sequence-based evaluation of promoter context for prediction of transcriptional start sites in Arabidopsis and rice.

Hiratsuka T, Makita Y, Yamamoto YY. (2022) Sci Rep12: 6976.

https://doi.org/10.1038/s41598-022-11169-w

tools at  Github


71.

Mechanosensory trichome cells evoke a mechanical stimuli-induced immune response in Arabidopsis thaliana.

Matsumura M, Nomoto M, Itaya T, Aratani Y, Iwamoto M, Matsuura T, Hayashi Y, Mori T, Skelly M, Yamamoto YY, Kinoshita T, Mori I, Suzuki T, Betsuyaku S, Spoel S, Toyota M, Tada Y. (2022)  Nat Commun 13:1216.

https://doi.org/10.1038/s41467-022-28813-8


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70.

Suppression of MYC transcription activators by the immune cofactor NPR1 fine tunes plant immune responses.

Nomoto M, Skelly MJ, Itaya T, Suzuki T, Matsushita T, Tokizawa M, Kuwata K, Mori H,

Yamamoto YY, Higashiyama T, Tsukagoshi H, Shoel SH, Tada Y. (2021) Cell Rep 37: 110125.

https://doi.org/10.1016/j.celrep.2021.110125

PubMed


69.

Expression GWAS of PGIP1 identifies STOP1-dependent and -independent regulation of PGIP1 in aluminum stress signaling in Arabidopsis.

Agrahari RK, Enooto T, Ito H, Nakano Y, Yanase E, Watanabe T, Sadhukhan A, Iuchi S, Kobayashi M, Panda SK, Yamamoto YY, Koyama H, Kobayashi H. (2021) Front Plant Sci 12: 774687.

https://doi.org/10.3389/fpls.2021.774687


68. !

Cryptic promoter activation occurs by at least two different mechanisms in the Arabidopsis genome.

Kudo H, Matsuo M, Satoh S, Hata T, Hachisu R, Nakamura M, Yamamoto YY, Kimura H, Matsui M, Obokata J. (2021) Plant J 108: 29-39.

doi: 10.1111/tpj.15420

PubMed


67.

Efficient Agrobacterium tumefaciens-mediated stable genetic transformation of green microalgae, Chlorella sorokiniana.

Sharma PK, Gould VV, Yamamoto Y, Sahoo L. (2021) 3 Biotech 11: 196.

https://doi.org/10.1007/s13205-021-02750-7


66.

High affinity promoter binding of STOP1 is essential for the early aluminum-inducible expression of novel Al resistance genes GDH1 and GDH2 in Arabidopsis.

Tokizawa M, Enomoto T, Ito H, Wu L, Kobayashi Y, Mora-Macias J, Armenta-Medina D, Iuchi S, Kobayashi M, Nomoto M, Tada Y, Fujita M, Shinozaki K, Yamamoto YY, Kochian LV, Koyama H. (2021) J Exp Bot 72: 2769-2789.

doi: 10.1093/jxb/erab031

PubMed  Journal Site


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65.

Genome-wide association study and genomic prediction elucidate the distinct genetic architecture of aluminum and proton tolerance in Arabidopsis thaliana.

Nakano Y, Kusunoki K, Hoekenga OA, Tanaka K, Iuchi S, Sakata Y, Kobayashi M, Yamamoto YY, Koyama H, Kobayashi Y. (2020) Front Plant Sci 11: 405.

doi: 10.3389/fpls.2020.00405

PubMed   Journal Site


64.

Cytosolic GLUTAMINE SYNTHETASE 1;1 modulates metabolism and chloroplast development in roots. Kusano M, Fukushima A, Tabuchi-Kobayashi M, Funayama K, Kojima S, Maruyama K, Yamamoto YY, Nishizawa T, Kobayashi M, Wakazaki M, Sato M, Toyooka K, Osanai-Kondo K, Utsumi Y, Seki M, Fukai C, Saito K, Yamaya T. (2020) Plant Physiol 182: 1894-1909.

doi: 10.1104/pp.19.01118

PubMed   Journal Site


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63.

Sensitive To Proton Rhizotoxicity1 regulates salt and drought tolerance of Arabidopsis thaliana through transcriptional regulation of CIPK23.

Sadhukhan A, Enomoto T, Kobayashi Y, Watanabe T, Iuchi S, Kobayashi M, Sahoo L, Yamamoto YY, Koyama, H. (2019) Plant Cell Physiol 60: 2113-2126.

doi: 10.1093/pcp/pcz120

PubMed  Journal Site


62. !

Transcriptome analysis of the H2O2 response in Arabidopsis and partial identification of the transcriptional regulatory network.

Hieno A, Naznin HA, Hasegawa-Inaba K, Yokogawa T, Hayami N, Nomoto M, Tada Y, Yokogawa T, Higuchi M, Hanada K, Matui M, Hirayama T, Kusunoki K, Koyama H, Mitsuda N, Yamamoto YY. (2019) Plant Physiol 180: 1629-1646.

doi: 10.1104/pp.18.01426

PubMed  Journal Site


61.

SnRK1 kinase and the NAC transcription factor SOG1 are components of a novel signaling pathway mediating the low energy response triggered by depleted amounts of ATP.                                            

Hamasaki H, Kurihara Y, Kuromori T, Kusano H, Nagata N, Yamamoto YY, Shimada H, Matsui M. (2019) Front Plant Sci 10: Article 503.

doi: 10.3389/fpls.2019.00503

Journal Site  


60.

Characterization of NtSTOP1-regulating genes in tobacco under aluminum stress.

Ito H, Kobayashi Y, Yamamoto YY, Koyama H. (2019) Soil Sci Plant Nutr 65: 251-258.

doi: 10.1080/00380768.2019.1603064

Journal Site


59.

STOP1 regulates expression of HSFA2 and GDHs critical for low-oxygen tolerance in Arabidopsis.

Enomoto T, Tokizawa M, Ito H, Iuchi S, Kobayashi M, Yamamoto YY, Kobayashi Y, Koyama H. (2019) J Exp Bot 70: 3297-3311.

doi: 10.1093/jxb/erz124

PubMed  Journal Site


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58. #  <OUTSTANDING PAPER AWARD by TPJ in 2018>

Identifying the target genes of SUPPRESSOR OF GAMMA RESPONSE 1, a master transcription factor controlling DNA damage response in Arabidopsis.

Ogita N, Okushima Y, Tokizawa M, Yamamoto YY, Tanaka M, Seki M, Makita Y, Matsui M, Yoshiyama OK, Sakamoto T, Kurata T, Takahashi N, Umeda M. (2018) Plant J 94: 439-453. 

doi: 10.1111/tpj.13866

PubMed  Journal Site


57.

Characterization of CcSTOP1, a C2H2 type transcription factor regulates Al tolerance genes in pigeonpea.

Daspute AA, Kobayashi Y, Panda SK, Fakrudin B, Kobayashi Y, Tokizawa M, Iuchi S, Choudhary A, Yamamoto YY, Koyama H. (2018)  Planta 247: 201-214.

doi: 10.1007/s00425-017-2777-6

PubMed  Journal Site


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56. !  $  #   F1000 BIOLOGY

Light control of protein localization through phytochrome-mediated alternative promoter selection.

Ushijima T, Hanada K, Gotoh E, Yamori W, Kodama Y, Tanaka H, Kusano M, Fukushima A, Tokizawa M, Yamamoto YY, Tada Y, Suzuki Y, Matsushita T. (2017) Cell 171: 1316-1325.

doi: 10.1016/j.cell.2017.10.018

PubMed  Journal Site pdf


55.

Prediction of direct targets of Arabidopsis RRTF1, a H2O2 responsive AP2/ERF transcription factor which mediates multiple stress signals.

Hieno A, Matsuo M, Oelmüller R, Yamamoto YY. (2017) Endocytobiosis Cell Res 28: 9-13.

Journal Site  pdf


54. !

Identification of Arabidopsis genic and non-genic promoters by pair-end sequencing of TSS tags.

Tokizawa M, Kusunoki K, Koyama H, Kurotani A, Sakurai T, Suzuki Y, Kurata T, Yamamoto YY. Plant J 90: 587-605.

doi: 10.1111/tpj.13511

PubMed  Journal Site

tools at Github


53. !

Prediction of bipartite transcriptional regulatory elements using transcriptome data of Arabidopsis.

Yamamoto YY, Ichida H, Hieno A, Obata D, Tokizawa M, Nomoto M, Tada Y, Kusunoki K, Koyama H, Hayami N. (2017) DNA Res 24: 271-278.

doi: 10.1093/dnares/dsw065

PubMed  Journal Site


52.

Design of a synthetic promoter involved in the heat-induced transcriptional pathway in Arabidopsis, soybean, rice, and maize.

Maruyama K, Ogata T, Kanamori N, Yoshiwara K, Goto S, Yamamoto YY, TokoroY,  Noda C, Takaki Y, Urawa N, Iuchi S, Urano K, Sakurai T, Kojima M, Sakakibara H, Shinozaki K, Yamaguchi-Shinozaki K. (2017) Plant J 89: 671-681.

doi: 10.1111/tpj.13420

PubMed   Journal Site


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51.

Possible involvement of MYB44-mediated stomatal regulation in induced systemic resistance by Penicillium simplicissimum GP17-2 in Arabidopsis.

Hieno A, Naznin HA, Hyakumachi M, Higuchi M, Matsui M, Yamamoto YY. (2016) Microbes Environ 31: 154-159.

doi: 10.1264/jsme2.ME16025

PubMed Journal Site  pdf


50.

Specific detection of Type 1 and Type 2 isolates of Pyrenochaeta lycopersici by loop-mediated isothermal amplification reaction.

Hieno A, Naznin HA, Suga H, Yamamoto YY, Hyakumachi M. (2016) Acta Agri Scand, Sect B 66: 353-358. 

doi: 10.1080/09064710.2015.1120341

Journal Site


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49. !

The Response of Arabidopsis ELIP2 to UV-B, high light, and cold stress are regulated by a transcriptional regulatory unit composed of two elements.

Hayami N#, Sakai Y#, Saito T, Kimura M, Tokizawa M, Nomoto M, Tada Y,  Iuchi S, Yamamoto YY (2015) Plant Physiol 169: 840-855.

doi: 10.1104/pp.15.00398

Journal Site  PubMed


48.  #

High REDOX RESPONSIVE TRANSCRIPTION FACTOR1 levels result in accumulation of reactive oxygen species in Arabidopsis thaliana shoots and roots.

Matsuo M, Johnson JM, Hieno A, Tokizawa M, Nomoto M, Tada Y, Godfrey R, Obokata J, Sherameti I, Yamamoto YY, Böhmer FD, Oelmüller R (2015) Mol Plant 8: 1253-1273.

doi: 10.1016/j.molp.2015.03.011

Journal Site PubMed


47. #

STOP1, CAMTA2 and other transcription factors are involved in aluminum-inducible AtALMT1 expression.

Tokizawa M, Kobayashi Y, Saito T, Kobayashi M, Iuchi S, Nomoto M, Tada Y, Yamamoto YY*, Koyama H* (2015) Plant Physiol 167: 991-1003.

doi: 10.1104/pp.114.252742

Journal Site  PubMed


46.

A stable and efficient nuclear transformation system for the diatom Chaetoceros gracillis.

Ifuku K, Yan D, Miyahara M, Inoue-Kashino N, Yamamoto YY, Kashino Y (2015) Photosynth Res 123: 203-211.

doi: 10.1007/s11120-014-0048-y

Journal Site  PubMed


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45. !

Next-generation sequencing of genomic DNA fragments bound to a transcription factor in vitro reveals its regulatory potential.

Kurihara Y, Makita Y, Kawashima M, Hamasaki H, Yamamoto YY, Matsui M (2014) Genes 5: 1115-1131.

doi: 10.3390/genes5041115

Journal Site  PubMed pdf


44.

VuDREB2A, a novel DREB2-type transcription factor in the drought-tolerant legume cowpea mediates DRE-dependent expression of stress-responsive genes and confers enhanced drought risistance in transgenic Arabidopsis

Sadhukhan A, Kobayashi Y, Kobayashi Y, Tokizawa M, Yamamoto YY, Iuchi S, Koyama H, Panda SK, Sahoo L (2014) Planta 240: 645-664.

doi: 10.1007/s00425-014-2111-5

Journal Site  PubMed


43. !

ppdb: Plant Promoter Database ver 3.0

Hieno A, Naznin HA, Hyakumachi M, Sakurai T, Tokizawa M, Koyama H, Sato N, Nishiyama T, Hasebe M, Zimmer AD, Dang D, Reski R, Rensing S, Obokata J, Yamamoto YY (2014) Nucleic Acids Res 42: D1188-1192. 

doi: 10.1093/nar/gkt1027

Journal Site  PubMed


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42.

Analysis of environmental stress in plants with the aid of marker genes for H2O2 responses

Hieno A, Naznin HA, Sawaki K, Koyama H, Sakai Y, Ishino H, Hyakumachi M, Yamamoto YY (2013) Methods Enzymol 527: 221-237.

doi: 10.1016/B978-0-12-405882-8.00014-X

PubMed


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41. !  ###

Identification of cis-acting promoter elements in cold- and dehydration-induced transcriptional pathways in Arabidopsis, rice and soybean

Maruyama K, Todaka D, Mizoi J, Yoshida T, Kidokoro S, Matsukura S, Takasaki H, Sakurai T, Yamamoto YY, Yoshikawa K, Kojima M, Sakakibara H, Shinozaki K, Yamaguchi-Shinozaki K (2012) DNA Res 19, 37-49.

doi: 10.1093/dnares/dsr040

Journal Site PubMed


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40.

Characteristics of core promoter types with respect to gene structure and expression in Arabidopsis thaliana

Yamamoto YY*, Yoshioka Y, Hyakumachi M, and Obokata J (2011) DNA Res (*corresponding author), 18, 333-342.

doi: 10.1093/dnares/dsr020

Journal Site  PubMed pdf

Supplemental file (RARf tables used in the article)


39. !

Prediction of transcriptional regulatory elements for plant hormone responses based on microarray data

Yamamoto YY*, Yoshioka Y, Hyakumachi M, Maruyama K, Yamaguchi-Shinozaki K, Tokizawa M, Koyama H (2011) BMC Plant Biol 11, 39. (*corresponding author)

doi: 10.1186/1471-2229-11-39

Journal Site  pdf


38.

A common sequence motif involved in selection of transcription start sites of Arabidopsis and budding yeast tRNA genes

Yukawa Y, Dieci G, Alzapiedi M, Hiraga A, Hirai K, Yamamoto YY, Sugiura M. (2011) Genomics 97, 166-172.

doi: 10.1016/j.ygeno.2010.12.001

Journal Site PubMed


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37.  COVERE ARTICLE

Identification of photosynthetic sacoglossans from Japan

Yamamoto YY, Yusa Y, Yamamoto S, Hirano Y, Hirano Y, Motomura T, Tanemura T, Obokata J. (2009) Endocytobiosis Cell Res 19, 112-119.

JournalSite pdf


36.  !  $  #   F1000 BIOLOGY

Heterogeneity of Arabidopsis core promoters revealed by high-density TSS analysis

Yamamoto YY, Yoshitsugu T, Sakurai T, Seki M, Shinozaki K, Obokata J.(2009) Plant J 60: 350-362.

doi: 10.1111/j.1365-313X.2009.03958.x

PubMed , pdf


35.

Live imaging of chloroplast FtsZ1 filaments, rings, spirals, and motile dot structures in the AtMinE1 mutant and overexpressor of Arabidopsis thaliana

Fujiwara M, Sekine K, Yamamoto YY, Abe, Sato N, Itoh R. (2009) Plant Cell Physiol 50, 1116-1126.

doi: 10.1093/pcp/pcp063

PubMed


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34.  $  ##### ##### ##### #    F1000 BIOLOGY

Widespread translational inhibition by plant miRNAs and siRNAs

Brodersen P, Sakvarelidze-Achard L, Bruun-Rasmussen M, Dunoyer P, Yamamoto YY, Sieburth L, Voinnet O. (2008) Science 320, 1185-1190.

doi: 10.1126/science.1159151

PubMed 


33.

LET-dependent effects of heavy-ion beam irradiation in Arabidopsis thaliana

Kazama Y, Saito H, Yamamoto YY, Hayashi Y, Ichida H, Ryuto H, Fukunishi N, Abe T. (2008) Plant Biotech 25, 113-117.

doi: 10.5511/plantbiotechnology.25.113

Journal Site  pdf


32.  !

ppdb, a plant promoter database

Yamamoto YY, Obokata J. (2008) Nucleic Acids Res 36, D977-D981.

doi: 10.1093/nar/gkm785

Journal Site  PubMed pdf


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31.  !  #

Differentiation of core promoter architecture between plants and mammals revealed by LDSS analysis

Yamamoto YY*, Ichida H, Abe T, Suzuki Y, Sugano S, Obokata J. Nucleic Acids Res (2007)

35, 6219-6226. (*corresponding author)

doi: 10.1093/nar/gkm685

PubMed pdf


30.  !  $  ##   F1000 BIOLOGY

Identification of plant promoter constituents by analysis of local distribution of short sequences

Yamamoto YY*, Ichida H, Matsui M, Obokata J, Sakurai T, Satou M, Seki M, Shinozaki K, Abe T (2007) BMC Genomics 8:67. (*corresponding author)

doi: 10.1186/1471-2164-8-67

PubMed  Journal Site, pdf, Supplemental data (TableS1, S2, S3, S4, S5, FigS1) software 


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29.

In situ visible markers of Arabidopsis for radiation biology

Yamamoto YY, Saito M, Yoshida S, Abe T (2006) RIKEN Accel Prog Rep 39, 135.

pdf


28.

INCREASED LEVEL OF POLYPLOIDY1, a conserved repressor of CYCLINA2 transcription, controls endoreduplication in Arabidopsis

Yoshizumi T, Tsumoto Y, Takiguchi T, Nagata N, Yamamoto YY, Kawashima M, Ichikawa T, Nakazawa M, Yamamoto N, Matsui M (2006) Plant Cell 18, 2452-2468.

doi: 10.1105/tpc.106.043869

PubMed  Journal Site  pdf


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27.

Chlorophyll-deficient mutants of rice induced by C-ion irradiation

Abe T, Hayashi Y, Saito H, Takehisa H, Miyazawa Y, Yamamoto YY, Ryuto H, Fukunishi N, Sato M, Yoshida S, Kameya T (2005) RIKEN Accel Prog Rep 38, 132.


26.

Effect of heavy-ion beam irradiation on mutation induction in Arabidopsis thaliana (II)

Saito H, Yamamoto YY, Matsuyama T, Fukunishi N, Ryuto H, Abe T, Yoshida S (2005) RIKEN Accel Prog Rep 38, 130.

pdf


25.

Biological effects of heavy ion beam irradiation on turfgrass

Watanabe K, Suzuki C, Yamamoto YY, Abe T, Yoshida S, Yoneyama K (2005) RIKEN Accel Prog Rep 38, 133.


24.

Establishment of Arabidopsis thaliana lines mutagenized with heavy ion beam irradiation

Yamamoto YY, Saito H, Ryuto H, Fukunishi N, Abe T, Yoshida S (2005) RIKEN Accel Prog Rep 38, 131.

pdf


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23.  !

Global classification of transcriptional responses to light stress in Arabidopsis thaliana

Yamamoto YY*, Shimada Y, Kimura M, Manabe K, Sekine Y, Matsui M, Ryuto H, Fukunishi N, Abe T, Yoshida S (2004) Endocytobiosis Cell Res 15, 438-452. (*corresponding author)

pdf


22.

Characterization of plastid signaling in Arabidopsis with the aid of light stress response

Kimura M, Manabe K, Matsui M, Yamamoto YY* (2004). Endocytobiosis Cell Res 15, 345-349. (*corresponding author)


21.

Effect of heavy-ion beam irradiation on mutation induction in Arabidopsis thaliana

Saito H, Matsuyama T, Yamamoto YY, Abe T, Yoshida S (2004)  RIKEN Accel Prog Rep 37, 147.

pdf


20.

Isolation of light stress response mutants of Arabidopsis thaliana with the aid of heavy ion beam irradiation

Yamamoto YY, Abe T, Yoshida S (2004) RIKEN Accel Prog Rep 37, 148.


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19. ! #

Functional analysis of isoforms of NADPH:protochlorophyllide oxidoreductase (POR), PORB and PORC, in Arabidopsis thaliana

Masuda T, Fusada N, Oosawa N, Takamatsu K, Yamamoto YY, Ohto M, Nakamura K, Goto K, Shibata D, Shirano Y, Hayashi H, Kato T, Tabata S, Shimada H, Ohta H, Takamiya K (2003). Plant Cell Physiol 44, 963-974.

doi: 10.1093/pcp/pcg128

PubMed, pdf


18. !   COVER ARTICLE

Gene trapping of the Arabidopsis genome with a firefly luciferase reporter

Yamamoto YY, Tsuhara Y, Gohda K, Suzuki K, Matsui M. (2003).  Plant J 35, 273-283.

doi: 10.1046/j.1365-313X.2003.01797.x

PubMed, pdf with supplemental data


17. !

Analysis of hydrogen peroxide-independent expression of the high light-inducible ELIP2 gene with the aid of the ELIP2 promoter-luciferase fusion

Kimura M, Manabe K, Abe T, Yoshida S, Matsui M, Yamamoto YY*. (2003). Photochem Photobiol 77, 668-674. (*corresponding author)

doi: 10.1562/0031-8655(2003)0770668AOHPEO2.0.CO2

PubMed


16. !  ##

Identification of Arabidopsis genes regulated by high light stress using cDNA microarray

Kimura M#, Yamamoto YY#, Seki M, Sakurai T, Sato M, Abe T, Yoshida S, Manabe K, Shinozaki K, Matsui M. (2003). Photochem Photobiol 77, 226-233. (#equal contribution)

doi: 10.1562/0031-8655(2003)0770226IOAGRB2.0.CO2

PubMed


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15.

Polyribosome loading of spinach mRNAs for photosystem I subunits is controlled by photosynthetic electron transport: a crucial cis element in the spinach PsaD gene is located in the 5'-untranslated region

Sherameti I, Nakamura M, Yamamoto YY, Pfannschmidt T, Obokata J, Oelmüller R. (2002).  Plant J 32, 631-639.

doi: 10.1046/j.1365-313X.2002.01452.x

PubMed, pdf


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14. !

Arabidopsis transcriptional regulation by light stress via hydrogen peroxide-dependent and -independent pathways

Kimura M, Yoshizumi T, Manabe T, Yamamoto YY*, Matsui M. (2001).  Genes Cells 6, 607-617. (*corresponding author)

doi: 10.1046/j.1365-2443.2001.00446.x

PubMed, pdf


13. !

CIP4, a new COP1 target, is a nuclear-localized positive regulator of Arabidopsis photomorphogenesis

Yamamoto YY, Deng X-W, Matsui M. (2001). Plant Cell 13, 399-411.

doi: 10.1105/tpc.13.2.399

PubMed, full text @ PubMedCentral, pdf


12. ###

DFL1, an auxin-responsive GH3 gene homologue, negatively regulates shoot cell elongation and lateral root formation, and positively regulates the light response of hypocotyl length

Nakazawa M, Yabe N, Ichikawa T, Yamamoto YY, Yoshizumi T, Hasunuma K, Matsui M. (2001). Plant J 25, 213-221.

doi: 10.1111/j.1365-313X.2001.00957.x

PubMed, pdf


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11.

An Arabidopsis cotyledon-specific albino locus: a possible role in 16S rRNA maturation

Yamamoto YY*, Puente P, Deng X-W. (2000).  Plant Cell Physiol 41, 68-76.

doi: 10.1093/pcp/41.1.68

PubMed, pdf (*corresponding author)


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10. !  #

Role of COP1 interactive protein in mediating light-regulated gene expression in Arabidopsis

Yamamoto YY, Matsui M, Ang L-H, Deng X-W. (1998).  Plant Cell 10, 1083-1094.

doi: 10.1105/tpc.10.7.1083

PubMed, full text @PubMedCentral, pdf


9.

A new vector set for GAL4-dependent transactivation assay in plants

Yamamoto YY*, Deng X.-W. (1998). Plant Biotech 15, 217-220.(*corresponding author)

doi: 10.5511/plantbiotechnology.15.217

pdf

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8. !

Light-responsive elements of the tobacco PSI-D gene are located both upstream and within the transcribed region

Yamamoto YY, Kondo Y, Kato A, Tsuji H, Obokata J. (1997). Plant J 12, 255-265.

doi: 10.1046/j.1365-313X.1997.12020255.x

PubMedpdf


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7. !

5' leader of a photosystem I gene in Nicotiana sylvestris, psaDb, contains a translational enhancer

Yamamoto YY, Tsuji H, Obokata J. (1995).  J Biol Chem 270, 12466-12470.

doi: 10.1074/jbc.270.21.12466

PubMedpdf


6.

Early light-response of psaD, psaE and psaH gene families of photosystem I in Nicotiana sylvestris: psaD has an isoform of very quick response

Yamamoto YY, Nakamura M, Kondo Y, Tsuji H, Obokata J. (1995). Plant Cell Physiol 36, 727-732. 

doi: 10.1093/oxfordjournals.pcp.a078814

pdf


5.

Cloning of a nuclear-encoded photosystem I gene, psaEb, in Nicotiana sylvestris

Kubota T, Yamamoto YY, Obokata J. (1995). Plant Physiol 108, 1297-8.

doi: 10.1104/pp.108.3.1297

PubMed, pdf


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4.

Microheterogeneity of PSI-E subunit of photosystem I in Nicotiana sylvestris

Obokata J, Mikami K, Yamamoto Y, Hayashida N. (1994).  Plant Cell Physiol 35, 203-209.

doi: 10.1093/oxfordjournals.pcp.a078585

PubMed, pdf


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3.

Structure and expression of a nuclear gene for the PSI-D subunit of photosystem I in Nicotiana sylvestris

Yamamoto Y, Tsuji H, Obokata J. (1993). Plant Mol Biol 22, 985-994.

doi: 10.1007/BF00028971

PubMed, pdf


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2.

Nucleotide sequence of cDNA clones encoding PSI-D2 protein of photosystem I in Nicotiana sylvestris

Yamamoto Y, Tsuji H, Hayashida N, Inoue K, Obokata J. (1991).  Plant Mol Biol 17, 1251-1254.

doi: 10.1007/BF00028741

PubMed, pdf


1. !

Formation of chlorophyll-protein complexes during greening. 2. redistribution of chlorophyll among apoproteins

Tanaka A, Yamamoto Y, Tsuji H. (1991). Plant Cell Physiol 32, 195-204.

doi: 10.1093/oxfordjournals.pcp.a078064

abstract, pdf





1)self assessment :)




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