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菌株利用論文

NBRP病原細菌の菌株を利用して発表された論文

2020年
  • Yamaki S, Kuronuma S, Kawai Y, Yamazaki K: Inhibitory effect of a combination with novel jumbo bacteriophages ΦMV-1 and ΦMV-4 on Morganella morganii subsp. morganii growth and histamine accumulation. Internatinoal Journal of Food Microbiology. 317, Article number 108457, 2020
    【Morganella morganii GTC03692, 09451, 09548, 15044, 15046】
  • Tanno A, Fujino N, Yamada M, Sugiura H, Hirano T, Tanaka R, Sano H, Suzuki S, Okada Y, Ichinose M: Decreased expression of a phagocytic receptor Siglec-1 on alveolar macrophages in chronic obstructive pulmonary disease. Respiratory research. 21(1), 30, 2020
    【Haemophilus influenzae GTC15013】
  • Matsuda S, Hiyoshi H, Tandhavanant S, Kodama T: Advances on Vibrio parahaemolyticus research in the postgenomic era. Microbiol Immunol. 64(3), 167-181, 2020| doi: 10.1111/1348-0421.12767
    【Vibrio parahaemolyticus RIMD2210633】
  • Nguyen AQ, Shimohata T, Hatayama S, Tentaku A, Kido J, Bui TMH, Uebanso T, Mawatari K, Takahashi A: Type III Secretion Effector VopQ of Vibrio parahaemolyticus Modulates Central Carbon Metabolism in Epithelial Cells. mSphere. 5(2), e00960-19, 2020| doi: 10.1128/mSphere.00960-19
    【Vibrio parahaemolyticus RIMD2210633】
2019年
  • Ishida R, Ueda K, Kitano T, Yamamoto T, Mizutani Y, Tsutsumi Y, Imoto K and Yamamori Y: Fatal community-acquired Bacillus cereus pneumonia in an immunocompetent adult man: a case report. BMC Infectious Diseases. 19, 197, 2019
    【Bacillus anthracis GTC3P0881】
  • Hayashi M, Ochia T, Tago S, Tawarayama H, Hosoya T, Yahagi T, Ishiguro H, and Fujishima A: Fabrication of TiO2-coated Porous Silica Glass Tube and Evaluation as Environmental Purification Unit. Electrochemistry. 87(1), 1–7, 2019
    【Legionella pneumohila GTC11442】
  • Sato M, Ogura Y, Nakamura K, Nishida R, Gotoh Y, Hayashi M, Hisatsune J, Sugai M, Itoh T, and Hayashi T: Comparison of the sequencing bias of currently available library preparation kits for Illumina sequencing of bacterial genomes and metagenomes. DNA Reseaech. 26(5), 391–398, 2019| doi: 10.1093/dnares/dsz017
    【Tsukamurella pulmonis GTC14174/ Mycobacterium interjectum GTC12928/ Mycobacterium malmoense GTC15595T/ Serratia liquefaciens GTC10348/ Enterobacter aerogenes GTC09429/ Brachyspira pilosocoli GTC14179/ Streptobacillus moniliformis GTC15073/ Bacteroides fragilis GTC01774/ Staphylococcus epidermidis GTC13321】
  • Yamaguchi T: Antibacterial properties of nootkatone against Gram-positive bacteria. Natural Product Communications. June 2019, 1-5, 2019| doi: 10.1177/1934578X19859999
    【 Listeria monocytogenes GTC00149T / Corynebacterium diphtheria GTC00263T / Staphylococcus aureus GTC01770, 01772, 01181, 01186】
  • Gu D, Meng H, Li Y, Ge H, Jiao X: A GntR Family Transcription Factor (VPA1701) for Swarming Motility and Colonization of Vibrio parahaemolyticus. Pathogens. 8(4), 235, 2019| doi: 10.3390/pathogens8040235
    【Vibrio parahaemolyticus RIMD2210633】
  • Yang H, de Souza Santos M, Lee J, Law HT, Chimalapati S, Verdu EF, Orth K, Vallance BA: A Novel Mouse Model of Enteric Vibrio parahaemolyticus Infection Reveals that the Type III Secretion System 2 Effector VopC Plays a Key Role in Tissue Invasion and Gastroenteritis. mBio. 10(6), e02608-19, 2019| doi: 10.1128/mBio.02608-19
    【Vibrio parahaemolyticus RIMD2210633】
  • Regmi A, Boyd EF: Carbohydrate metabolic systems present on genomic islands are lost and gained in Vibrio parahaemolyticus. BMC Microbiol. 19(1), 112, 2019| doi: 10.1186/s12866-019-1487-6
    【Vibrio parahaemolyticus RIMD2210633】
  • Hirano T, Okubo M, Tsuda H, Yokoyama M, Hakamata W, Nishio T: Chitin Heterodisaccharide, Released from Chitin by Chitinase and Chitin Oligosaccharide Deacetylase, Enhances the Chitin-Metabolizing Ability of Vibrio parahaemolyticus. J Bacteriol. 201(20), e00270-19, 2019| doi: 10.1128/JB.00270-19
    【Vibrio parahaemolyticus RIMD2210633】
  • Plaza N, Pérez-Reytor D, Ramírez-Araya S, Pavón A, Corsini G, Loyola DE, Jaña V, Pavéz L, Navarrete P, Bastías R, Castillo D, García K: Conservation of Small Regulatory RNAs in Vibrio parahaemolyticus: Possible role of RNA-OUT Encoded by the Pathogenicity Island (VPaI-7) of Pandemic Strains. Int J Mol Sci. 20(11), 2827, 2019| doi: 10.3390/ijms20112827
    【Vibrio parahaemolyticus RIMD2210633】
  • McDonald ND, Regmi A, Morreale DP, Borowski JD, Boyd EF: CRISPR-Cas systems are present predominantly on mobile genetic elements in Vibrio species. BMC Genomics. 20(1), 105, 2019| doi: 10.1186/s12864-019-5439-1
    【Vibrio parahaemolyticus RIMD2210633】
  • Matsuda S, Okada R, Tandhavanant S, Hiyoshi H, Gotoh K, Iida T, Kodama T: Export of a Vibrio parahaemolyticus toxin by the sec and type III secretion machineries in tandem. Nat Microbiol. 4(5), 781-788, 2019| doi: 10.1038/s41564-019-0368-y
    【Vibrio parahaemolyticus RIMD2210633】
  • Zhang Y, Hu L, Qiu Y, Osei-Adjei G, Tang H, Zhang Y, Zhang R, Sheng X, Xu S, Yang W, Yang H, Yin Z, Yang R, Huang X, Zhou D: QsvR integrates into quorum sensing circuit to control Vibrio parahaemolyticus virulence. Environ Microbiol. 21(3), 1054-1067, 2019| doi: 10.1111/1462-2920.14524
    【Vibrio parahaemolyticus RIMD2210633】
  • Gregory GJ, Morreale DP, Carpenter MR, Kalburge SS, Boyd EF: Quorum Sensing Regulators AphA and OpaR Control Expression of the Operon Responsible for Biosynthesis of the Compatible Solute Ectoine. Appl Environ Microbiol. 85(22), e01543-19, 2019| doi: 10.1128/AEM.01543-19
    【Vibrio parahaemolyticus RIMD2210633】
  • Ben-Yaakov R, Salomon D: The regulatory network of Vibrio parahaemolyticus type VI secretion system 1. Environ Microbiol. 21(7), 2248-2260, 2019| doi: 10.1111/1462-2920.14594
    【Vibrio parahaemolyticus RIMD2210633】
  • Zeb S, Shah MA, Yasir M, Awan HM, Prommeenate P, Klanchui A, Wren BW, Thomson N, Bokhari H: Type III secretion system confers enhanced virulence in clinical non-O1/non-O139 Vibrio cholera. Microb Pathog. 135, 103645, 2019| doi: 10.1016/j.micpath.2019.103645
    【Vibrio parahaemolyticus RIMD2210633】
  • Hubbard TP, D'Gama JD, Billings G, Davis BM, Waldor MK: Unsupervised learning approach for comparing multiple transposon insertion sequencing studies. mSphere. 4(1), pii: e00031-19, 2019| doi: 10.1128/mSphere.00031-19
    【Vibrio parahaemolyticus RIMD2210633】
  • Wu K, Zheng Y, Wu Q, Chen H, Fu S, Kan B, Long Y, Ni X, Tu J: Vibrio parahaemolyticus cqsA controls production of quorum sensing signal molecule 3-hydroxyundecan-4-one and regulates colony morphology. J Microbiol. 57(12), 1105-1114, 2019| doi: 10.1007/s12275-019-9379-x
    【Vibrio parahaemolyticus RIMD2210633】
2018年
  • Ashikawa S, Tarumoto N, Imai K, Sakai J, Kodana M, Kawamura T, Ikebuchi K, Murakami T, Mitsutake K, Maesaki S and Maeda T: Rapid identification of pathogens from positive blood culture bottles with the MinION nanopore sequencer. J Clin Microbiol. 67, 1589-1595, 2018| doi 10.1099/jmm.0.000855
    【Staphylococcus aureus GTC01524/ Streptococcus epidermidis GTC01871/ Escherichia coli GTC00503/ Klebsiella pneumonia GTC15087/ Pseudomonas aeruginosa GTC13866 / Burkholderia pseudomallei GTC3P0881, 3P0017】
  • Hagiya H, Sugawara Y, Kimura K, Hamaguchi S, Nish Ii, Hayashi M, Akeda Y, Tomono K: Emergence of daptomycin non-susceptible coagulase-negative Staphylococci in patients with cardiovascular device infections. Medicine. 97(49), e13487, 2018
    【Staphylococcus capitis GTC00727T】
  • Chimalapati S, de Souza Santos M, Servage K, De Nisco NJ, Dalia AB, Orth K: Natural transformation of Vibrio parahaemolyticus: A rapid method to create genetic deletions. J Bacteriol. pii: JB.00032-18, 2018| doi: 10.1128/JB.00032-18
    【Vibrio parahaemolyticus RIMD2210633】
  • Dar Y, Salomon D, Bosis E: The Antibacterial and Anti-Eukaryotic Type VI Secretion System MIX-Effector Repertoire in Vibrionaceae. Mar Drugs. pii: E433, 2018| doi: 10.3390/md16110433
    【Vibrio parahaemolyticus RIMD2210633】
  • Getz LJ, Thomas NA: The Transcriptional regulator HlyU positively regulates exsA expression leading to type III secretion system-1 activation in Vibrio parahaemolyticus. J Bacteriol. pii: JB.00653-17, 2018| doi: 10.1128/JB.00653-17
    【Vibrio parahaemolyticus RIMD2210633】
  • Jiang N, Tang L, Xie R, Li Z, Burkinshaw B, Liang X, Sosa D, Aravind L, Dong T, Zhang D, Zheng J: Vibrio parahaemolyticus RhsP represents a widespread group of pro-effectors for type VI secretion systems. Nat Commun. Sep 25;9(1), 3899, 2018| doi: 10.1038/s41467-018-06201-5
    【Vibrio parahaemolyticus RIMD2210633】
  • Tandhavanant S, Matsuda S, Hiyoshi H, Iida T, Kodama T: Vibrio parahaemolyticus senses intracellular K+ to translocate type III secretion system 2 effectors effectively.MBio. pii: e01366-18, 2018
    【Vibrio parahaemolyticus RIMD2210633】
2017年
  • Tamura S, Maeda T, Misawa K, Osa, Hamamoto T, Yuki A, Imai K, Mikita K, Morichika K, Kawana A, Matsumoto H, Nonoyama S: Development of a highly resolved loop-mediated isothermal amplification method to detect the N526K ftsI mutation of β-lactamase-negative ampicillin-resistant Haemophilus influenza. Journal of Microbiological Methods. Volume 141, 108-114, 2017
    【Haemophilus influenza GTC14202T, 14396, 15012, 15018, 15023, 15028, 15030, 14997, 03686, 00893/ Haemophilus haemolyticus GTC 02091/ Haemophilus parainfluenzae GTC 15009T/ Aggregatibacter segnis GTC 03797/ Aggregatibacter aphrophilus GTC15056/ Pasteurella multocida GTC3P0221】
  • Mitobe J, Ritam Sinha, Soma Mitra, Dhrubajyoti Nag, Saito N, Shimuta K, Koizumi N, Hemanta Koley: An attenuated Shigella mutant lacking the RNA-binding protein Hfq affords cross protection against Shigella strains of broad serotype. PLOS neglected tropical diseases. 11(7), e0005728, 2017
    【Shigella flexneri GTC 01922, 01924, 01927】
  • Sakai J, Maeda T, Tarumoto N, Misawa K, Tamura S, Imai K, Yamaguchi T, Iwata S, Murakami T, Maesaki S: A novel detection procedure for mutations in the 23S rRNA gene of Mycoplasma pneumoniae with peptide nucleic acid-mediated loop-mediated isothermal amplification assay. Journal of Microbiological Methods. Volume 141, 90-96, 2017
    【Aggregatibacter aphrophilis GTC15056/ Aggregatibacter segnis GTC03797/ Haemophilus haemolytics GTC15009/ Haemophilus parainfluenzae GTC02091/ Pasteurella multocida GTC3P0221/ Mycobacterium africanum GTC12853/ Mycobacterium microti GTC3P0006T/ Mycobacterium tuberculosis GTC3P0510, 3P0512, 3P0523】
  • Li P, Kinch LN, Ray A, Dalia AB, Cong Q, Nunan LM, Camilli A, Grishin NV, Salomon D, Orth K: Acute hepatopancreatic necrosis disease-causing Vibrio parahaemolyticus strains maintain an antibacterial Type VI secretion system with versatile effector repertoires. Appl Environ Microbiol. 83(13), pii: e00737-17, 2017| doi: 10.1128/AEM.00737-17
    【Vibrio parahaemolyticus RIMD2210633】
  • Richards GP, Watson MA, Needleman DS, Uknalis J, Boyd EF, Fay JP: Mechanisms for pseudoalteromonas piscicida-induced killing of Vibrios and other bacterial pathogens. Appl Environ Microbiol. 83(11), pii: e00175-17, 2017| doi: 10.1128/AEM.00175-17
    【Vibrio parahaemolyticus RIMD2210633】
  • de Souza Santos M, Salomon D, Orth K: T3SS effector VopL inhibits the host ROS response, promoting the intracellular survival of Vibrio parahaemolyticus. PLoS Pathog. 13(6), e1006438, 2017| doi: 10.1371/journal.ppat.1006438
    【Vibrio parahaemolyticus RIMD2210633】
  • De Nisco NJ, Kanchwala M, Li P, Fernandez J, Xing C, Orth K: The cytotoxic type 3 secretion system 1 of Vibrio rewires host gene expression to subvert cell death and activate cell survival pathways. Sci Signal. 10(479), pii: eaal4501, 2017| doi: 10.1126/scisignal.aal4501
    【Vibrio parahaemolyticus RIMD22220003, 22220004】
2016年
  • Mizuno T et al.: Core housekeeping proteins useful for identification and classification of mycobacteria. Microbial Resources and Systematics. 32（1）, 25-37, 2016
    【Mycobacterium abscessus GTC 15113, 15115/ Mycobacterium avium GTC 15594/ Mycobacterium branderi GTC 00811/ Mycobacterium chelonae GTC 12637, 15348/ Mycobacterium flavescens GTC 15352/ Mycobacterium fortuitum GTC 12780, 15396/ Mycobacterium gordonae GTC 15401/ Mycobacterium kansasii GTC 15535, 03844/ Mycobacterium lentiflavum GTC 03852/ Mycobacterium malmoense GTC 15595, 03155/ Mycobacterium sphagni GTC 01619/ Mycobacterium peregrinum GTC 01725, 15642, 15641,16404/ Mycobacterium interjectum　GTC 12928/ Mycobacterium scrofulaceum GTC 12927/ Mycobacterium senegalense GTC 01622/ Mycobacterium szulgai GTC 15712/ Mycobacterium triplex GTC 12949/ Mycobacterium vaccae GTC 15849】
  • Mikamo H et al.: 6 種類のプラスミ性カルバペネマーゼ遺伝子スクリーニングを目的とした Multiplex PCR 法の検討. 医学検査. Vol.64 No.4, 2015
    【Pseudomonas putida GTC14669, 14668/ Aeromonas caviae GTC11324/ Hafnia alvei GTC00104】
  • Kawamura Y et al.: Development of loop-mediated isothermal amplification to detect Streptococcus suis and its application to retail pork meat in Japan. International Journal of Food Microbiology. 208, 35-42, 2015
    【Streptococccus suis GTC 00430, 01241, 01244, 01243, 13835, 13836, 13837, 13838, 13839, 13840, 13841, 13842】
  • Ogawa H, Fujikura D, Ohnuma M, Ohnishi N, Hang'ombe B M, Mimuro H, Ezaki T, Mweene A S, Higashi H: Bacillus cereus from the environment is genetically related to the highly pathogenic B. cereus in Zambia. J. VET. MED. SCI. 77(8), 993-995, 2015
    【Bacillus cereus GTC03221】
  • Ogawa H, Fujikura D, Ohnuma M, Ohnishi N, Hang'ombe B M, Mimuro H, Ezaki T, Mweene A S, Higashi H: A novel multiplex PCR discriminates Bacillus anthracis and its genetically related strains from other Bacillus cereus group species. PLoS One. 10(3), e0122004, 2015
    【Bacillus cereus GTC02826, 02891, 02896, 03222, 02916, 02917】
  • Kimura K, Shailesh Kumar, Masahiro T, Shanmugam Mayilraj: Genome sequencing, annotation of Citrobacter freundii strain GTC 09479. Genomics Data. 2, 40-41, 2014
    【Citrobacter freundii GTC 09479】
  • Hayashi M et al.: Use of blood-free enrichment broth in the development of a rapid protocol to detect Campylobacter in twenty-five grams of chicken meat. Int J Food Microbiol. 163, 41-46, 2013
    【Campylobacter jejuni GTC 00259, 14977/ Campylobacter coli GTC 14978, 15058】
  • Kawamura Y et al.: Shiga Toxin 2f-Producing Escherichia albertii from a Symptomatic Human. Japanese Journal of Infectious Diseases. 67(3), 204-8, 2013
    【Escherichia coli GTC 01739, 01068, 01786, 02003, 02004, 01064, 01259, 00840, 01066, 01067, 01061, 01065, 01063, 01062, 00837, 00838, 00841, 00839, 01060, 01059, 08272, 09837, 10523, 12094, 10508】
  • Kawamura Y et al.: Isolation and Characteristics of Shiga Toxin 2f-Producing Escherichia coli among Pigeons in Kyushu, Japan. PLOS ONE. 9(1), e86076, 2013
    【Escherichia coli GTC 01739, 01068, 01786, 02003, 02004, 01064, 01259, 00840, 01066, 01067, 01061, 01065, 01063, 01062, 00837, 00838, 00841, 00839, 01060, 01059, 08272, 09837, 10523, 12094, 10508】
  • Hayashi M et al.: A New Protocol to Detect Multiple Foodborne Pathogens with PCR Dipstick DNA Chromatography after a Six-Hour Enrichment Culture in a Broad-Range Food Pathogen Enrichment Broth. BioMed Research International. Volume 2013, Article ID 295050, 10 pages, 2013
    【E.coli GTC 14538, 14548, 14605, 14606, 14516, 14540, 14549, 14557, 14558, 14515, 14539, 14567,
    14517, 14528, 14541, 14508, 14582, 14518, 14529, 14530, 14577, 14601, 14602, 14603, 14513, 14514,
    14524, 14525, 14537, 14546, 14547, 14550, 14553, 14560, 14510, 14511, 14512, 14521, 14535, 14536,
    14544, 14545, 14551, 14552, 14507, 14520, 14530, 14543, 14555, 14556, 14566, 14571, 14587, 14588,
    14240, 14243, 14251, 14259, 14260, 14241, 14242, 14245, 14262, 13248, 14254, 14249, 14252, 14256,
    14244, 14246, 14247/ Salmonella enterica GTC 02557, 02561, 02562, 02563, 02564, 02571, 02572, 02573, 02574, 02575, 03838, 00131, 02377, 02382, 02387, 02389, 02390, 13214, 13215, 13216, 13217, 13218, 13219, 13220, 13221, 02558, 02560, 3P001, 3P074, 3P076, 3P081, 3P085, 3P087, 3P091, 3P095, 3P100, 3P106, 3P002, 3P082, 3P083/ Salmonella bongori GTC03793T/ Shigella boydii GTC 00779T, 01912, 01913, 01914, 01915, 01915, 01916, 01917/ Shigella dysenteriae GTC 01057T, 00786, 01929, 01930, 14808, 14809, 14810, 14811, 14812, 14813, 14814, 14815, 14816, 14817, 14818, 14819, 14820/ Shigella flexneri GTC 0780T, 01918, 01920, 02007, 02008, 02009, 02010, 02011, 02012, 02013, 02015, 02016, 02014/ Shigella sonnei GTC 00781T, 01909, 01910, 01911, 01931, 01932, 01933/ Escherichia coli GTC00503】
  • Kawamura Y et al.: Evaluation of a Simple Protein Extraction Method for Species Identification of Clinically Relevant Staphylococci by Matrix-Assisted Laser Desorption Ionization–Time of Flight Mass Spectrometry. J Clin Microbiol. 50(12), 3862-6, 2012
    【Staphylococcus aureus GTC 00286/ Staphylococcus epidermidis GTC 00289/ Staphylococcus capitis GTC 00287/ Staphylococcus caprae GTC 00378/ Staphylococcus haemolyticus GTC 00290/ Staphylococcus lugdunensis GTC 00458/ Staphylococcus saprophyticus GTC 00265/ Staphylococcus cohnii GTC 00248/ Staphylococcus hominis GTC 00485/ Staphylococcus schleiferi GTC 00483/ Staphylococcus warneri GTC 00293】
  • Kawamura Y et al.: Complete Genome Sequence of Helicobacter cinaedi Strain PAGU611, Isolated in a Case of Human Bacteremia. J Bacteriol. 194(14), 3744-5, 2012
    【Helicobacter cinaedi GTC 16549】